Cluster: HRGMv2_4373_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4373_118 | HRGMv2_4373_118_1 | 3 | 1760 | - | GH38 |
| TF | HRGMv2_4373_118 | HRGMv2_4373_118_2 | 1960 | 2352 | + | FUR |
| pfam | HRGMv2_4373_118 | HRGMv2_4373_118_3 | 2400 | 2954 | + | Rubrerythrin | RUBY_RBDX |
| TC | HRGMv2_4373_118 | HRGMv2_4373_118_4 | 3099 | 3872 | - | 3.A.1.34.1 |
| TC | HRGMv2_4373_118 | HRGMv2_4373_118_5 | 3865 | 4758 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_4373_118_1
Type: CAZyme
Location: 3 - 1760 (-)
Type: CAZyme
Location: 3 - 1760 (-)
Gene ID: HRGMv2_4373_118_2
Type: TF
Location: 1960 - 2352 (+)
Type: TF
Location: 1960 - 2352 (+)
Gene ID: HRGMv2_4373_118_3
Type: pfam
Location: 2400 - 2954 (+)
Type: pfam
Location: 2400 - 2954 (+)
Gene ID: HRGMv2_4373_118_4
Type: TC
Location: 3099 - 3872 (-)
Type: TC
Location: 3099 - 3872 (-)
Gene ID: HRGMv2_4373_118_5
Type: TC
Location: 3865 - 4758 (-)
Type: TC
Location: 3865 - 4758 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.