Cluster: HRGMv2_4373_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4373
- CGC Family ID: CGCFAM_01278
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4373_104 | HRGMv2_4373_104_4 | 2104 | 2982 | + | 9.B.34.1.2 |
| NULL(UNKNOWN) | HRGMv2_4373_104 | HRGMv2_4373_104_5 | 2979 | 3068 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4373_104 | HRGMv2_4373_104_6 | 3065 | 3871 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4373_104 | HRGMv2_4373_104_7 | 3983 | 5629 | + | GH28 |
Gene ID: HRGMv2_4373_104_4
Type: TC
Location: 2104 - 2982 (+)
Type: TC
Location: 2104 - 2982 (+)
Gene ID: HRGMv2_4373_104_5
Type:
Location: 2979 - 3068 (-)
Type:
Location: 2979 - 3068 (-)
Gene ID: HRGMv2_4373_104_6
Type: TF
Location: 3065 - 3871 (-)
Type: TF
Location: 3065 - 3871 (-)
Gene ID: HRGMv2_4373_104_7
Type: CAZyme
Location: 3983 - 5629 (+)
Type: CAZyme
Location: 3983 - 5629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.