Cluster: HRGMv2_4373_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4373_94 | HRGMv2_4373_94_1 | 3 | 1382 | + | GH87 |
| CAZyme | HRGMv2_4373_94 | HRGMv2_4373_94_2 | 1447 | 3597 | + | GH87 |
| TC | HRGMv2_4373_94 | HRGMv2_4373_94_3 | 3601 | 5508 | + | 9.B.33.1.1 |
| TF | HRGMv2_4373_94 | HRGMv2_4373_94_4 | 5483 | 7024 | + | HTH_AraC |
| TC | HRGMv2_4373_94 | HRGMv2_4373_94_5 | 7073 | 8035 | + | 3.A.1.1.44 |
Gene ID: HRGMv2_4373_94_1
Type: CAZyme
Location: 3 - 1382 (+)
Type: CAZyme
Location: 3 - 1382 (+)
Gene ID: HRGMv2_4373_94_2
Type: CAZyme
Location: 1447 - 3597 (+)
Type: CAZyme
Location: 1447 - 3597 (+)
Gene ID: HRGMv2_4373_94_3
Type: TC
Location: 3601 - 5508 (+)
Type: TC
Location: 3601 - 5508 (+)
Gene ID: HRGMv2_4373_94_4
Type: TF
Location: 5483 - 7024 (+)
Type: TF
Location: 5483 - 7024 (+)
Gene ID: HRGMv2_4373_94_5
Type: TC
Location: 7073 - 8035 (+)
Type: TC
Location: 7073 - 8035 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.