Cluster: HRGMv2_4373_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4373_61 | HRGMv2_4373_61_2 | 104 | 3121 | + | GH167 |
| pfam | HRGMv2_4373_61 | HRGMv2_4373_61_3 | 3475 | 4113 | - | PG_binding_1 | Hydrolase_2 |
| pfam | HRGMv2_4373_61 | HRGMv2_4373_61_4 | 4323 | 4820 | + | Amidase_6 |
| TC | HRGMv2_4373_61 | HRGMv2_4373_61_5 | 5041 | 5889 | + | 3.A.1.3.27 |
| TC | HRGMv2_4373_61 | HRGMv2_4373_61_6 | 5973 | 6677 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_4373_61_2
Type: CAZyme
Location: 104 - 3121 (+)
Type: CAZyme
Location: 104 - 3121 (+)
Gene ID: HRGMv2_4373_61_3
Type: pfam
Location: 3475 - 4113 (-)
Type: pfam
Location: 3475 - 4113 (-)
Gene ID: HRGMv2_4373_61_4
Type: pfam
Location: 4323 - 4820 (+)
Type: pfam
Location: 4323 - 4820 (+)
Gene ID: HRGMv2_4373_61_5
Type: TC
Location: 5041 - 5889 (+)
Type: TC
Location: 5041 - 5889 (+)
Gene ID: HRGMv2_4373_61_6
Type: TC
Location: 5973 - 6677 (+)
Type: TC
Location: 5973 - 6677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.