Cluster: HRGMv2_4373_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4373_3 | HRGMv2_4373_3_2 | 329 | 1099 | + | 2.A.66.1.32 |
| pfam | HRGMv2_4373_3 | HRGMv2_4373_3_3 | 1133 | 1678 | + | MatE |
| CAZyme | HRGMv2_4373_3 | HRGMv2_4373_3_4 | 1723 | 3216 | + | GH32 |
| CAZyme | HRGMv2_4373_3 | HRGMv2_4373_3_5 | 3483 | 6191 | + | GH38 |
| pfam | HRGMv2_4373_3 | HRGMv2_4373_3_6 | 6231 | 7172 | + | Hydrolase | HAD_2 |
| CAZyme | HRGMv2_4373_3 | HRGMv2_4373_3_7 | 7258 | 9768 | + | GH106 |
Gene ID: HRGMv2_4373_3_2
Type: TC
Location: 329 - 1099 (+)
Type: TC
Location: 329 - 1099 (+)
Gene ID: HRGMv2_4373_3_3
Type: pfam
Location: 1133 - 1678 (+)
Type: pfam
Location: 1133 - 1678 (+)
Gene ID: HRGMv2_4373_3_4
Type: CAZyme
Location: 1723 - 3216 (+)
Type: CAZyme
Location: 1723 - 3216 (+)
Gene ID: HRGMv2_4373_3_5
Type: CAZyme
Location: 3483 - 6191 (+)
Type: CAZyme
Location: 3483 - 6191 (+)
Gene ID: HRGMv2_4373_3_6
Type: pfam
Location: 6231 - 7172 (+)
Type: pfam
Location: 6231 - 7172 (+)
Gene ID: HRGMv2_4373_3_7
Type: CAZyme
Location: 7258 - 9768 (+)
Type: CAZyme
Location: 7258 - 9768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
CAKSQL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.