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Cluster: HRGMv2_4372_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4372_1 HRGMv2_4372_1_96 116032 117282 + GH175
pfam HRGMv2_4372_1 HRGMv2_4372_1_97 117295 118047 - DUF218
TC HRGMv2_4372_1 HRGMv2_4372_1_98 118091 119923 - 2.A.16.2.2
TC HRGMv2_4372_1 HRGMv2_4372_1_99 119935 120261 - 2.A.78.1.1
TC HRGMv2_4372_1 HRGMv2_4372_1_100 120254 120958 - 2.A.78.1.1
pfam HRGMv2_4372_1 HRGMv2_4372_1_101 121170 122579 + MBOAT
CAZyme HRGMv2_4372_1 HRGMv2_4372_1_102 122664 124505 + CE4
Gene ID: HRGMv2_4372_1_96
Type: CAZyme
Location: 116032 - 117282 (+)
Gene ID: HRGMv2_4372_1_97
Type: pfam
Location: 117295 - 118047 (-)
Gene ID: HRGMv2_4372_1_98
Type: TC
Location: 118091 - 119923 (-)
Gene ID: HRGMv2_4372_1_99
Type: TC
Location: 119935 - 120261 (-)
Gene ID: HRGMv2_4372_1_100
Type: TC
Location: 120254 - 120958 (-)
Gene ID: HRGMv2_4372_1_101
Type: pfam
Location: 121170 - 122579 (+)
Gene ID: HRGMv2_4372_1_102
Type: CAZyme
Location: 122664 - 124505 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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