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Cluster: HRGMv2_4372_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4372_61 HRGMv2_4372_61_4 3631 6198 - 3.A.1.32.2
TC HRGMv2_4372_61 HRGMv2_4372_61_5 6171 7058 - 3.A.1.32.2
pfam HRGMv2_4372_61 HRGMv2_4372_61_6 7263 8126 - DUF4430
pfam HRGMv2_4372_61 HRGMv2_4372_61_7 8155 9753 - SLH | SLH | SLH | Prenyltrans | SQHop_cyclase_C
CAZyme HRGMv2_4372_61 HRGMv2_4372_61_8 10213 13083 + GH2
Gene ID: HRGMv2_4372_61_4
Type: TC
Location: 3631 - 6198 (-)
Gene ID: HRGMv2_4372_61_5
Type: TC
Location: 6171 - 7058 (-)
Gene ID: HRGMv2_4372_61_6
Type: pfam
Location: 7263 - 8126 (-)
Gene ID: HRGMv2_4372_61_7
Type: pfam
Location: 8155 - 9753 (-)
Gene ID: HRGMv2_4372_61_8
Type: CAZyme
Location: 10213 - 13083 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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