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Cluster: HRGMv2_4372_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4372_50 HRGMv2_4372_50_6 5623 6909 - GT2
TC HRGMv2_4372_50 HRGMv2_4372_50_7 7296 9674 + 3.A.9.1.2
pfam HRGMv2_4372_50 HRGMv2_4372_50_8 9801 10484 + DUF5067
pfam HRGMv2_4372_50 HRGMv2_4372_50_9 10663 12402 + NFACT-R_1 | NFACT_N | NFACT-R_2
TC HRGMv2_4372_50 HRGMv2_4372_50_10 12561 13940 + 2.A.66.1.33
TF HRGMv2_4372_50 HRGMv2_4372_50_11 14019 14666 + 0045030
pfam HRGMv2_4372_50 HRGMv2_4372_50_12 14663 15478 + Asp23
CAZyme HRGMv2_4372_50 HRGMv2_4372_50_13 15644 18355 + GH106
Gene ID: HRGMv2_4372_50_6
Type: CAZyme
Location: 5623 - 6909 (-)
Gene ID: HRGMv2_4372_50_7
Type: TC
Location: 7296 - 9674 (+)
Gene ID: HRGMv2_4372_50_8
Type: pfam
Location: 9801 - 10484 (+)
Gene ID: HRGMv2_4372_50_9
Type: pfam
Location: 10663 - 12402 (+)
Gene ID: HRGMv2_4372_50_10
Type: TC
Location: 12561 - 13940 (+)
Gene ID: HRGMv2_4372_50_11
Type: TF
Location: 14019 - 14666 (+)
Gene ID: HRGMv2_4372_50_12
Type: pfam
Location: 14663 - 15478 (+)
Gene ID: HRGMv2_4372_50_13
Type: CAZyme
Location: 15644 - 18355 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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