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Cluster: HRGMv2_4372_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4372_44 HRGMv2_4372_44_1 2 2458 - GH141
CAZyme HRGMv2_4372_44 HRGMv2_4372_44_2 2481 5546 - GH141
NULL(UNKNOWN) HRGMv2_4372_44 HRGMv2_4372_44_3 5536 8781 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4372_44 HRGMv2_4372_44_4 8795 11779 - SLH | SLH | SLH | Big_5 | Big_5
TC HRGMv2_4372_44 HRGMv2_4372_44_5 11832 13379 - 3.A.1.1.10
TC HRGMv2_4372_44 HRGMv2_4372_44_6 13428 14309 - 3.A.1.1.29
TC HRGMv2_4372_44 HRGMv2_4372_44_7 14334 15287 - 3.A.1.1.10
pfam HRGMv2_4372_44 HRGMv2_4372_44_8 15274 17499 - FAD_binding_2 | FAD_oxidored | NAD_binding_8
TC HRGMv2_4372_44 HRGMv2_4372_44_9 17588 19366 - 9.B.33.1.1
Gene ID: HRGMv2_4372_44_1
Type: CAZyme
Location: 2 - 2458 (-)
Gene ID: HRGMv2_4372_44_2
Type: CAZyme
Location: 2481 - 5546 (-)
Gene ID: HRGMv2_4372_44_3
Type:
Location: 5536 - 8781 (-)
Gene ID: HRGMv2_4372_44_4
Type: pfam
Location: 8795 - 11779 (-)
Gene ID: HRGMv2_4372_44_5
Type: TC
Location: 11832 - 13379 (-)
Gene ID: HRGMv2_4372_44_6
Type: TC
Location: 13428 - 14309 (-)
Gene ID: HRGMv2_4372_44_7
Type: TC
Location: 14334 - 15287 (-)
Gene ID: HRGMv2_4372_44_8
Type: pfam
Location: 15274 - 17499 (-)
Gene ID: HRGMv2_4372_44_9
Type: TC
Location: 17588 - 19366 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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