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Cluster: HRGMv2_4372_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4372_1 HRGMv2_4372_1_82 99912 100955 + 9.B.146.1.3
TC HRGMv2_4372_1 HRGMv2_4372_1_83 101030 102214 + 2.A.103.1.3
CAZyme HRGMv2_4372_1 HRGMv2_4372_1_84 102610 103716 + GT28
pfam HRGMv2_4372_1 HRGMv2_4372_1_85 103826 104767 + SpoIID
CAZyme HRGMv2_4372_1 HRGMv2_4372_1_86 104901 106367 + GH77
Gene ID: HRGMv2_4372_1_82
Type: TC
Location: 99912 - 100955 (+)
Gene ID: HRGMv2_4372_1_83
Type: TC
Location: 101030 - 102214 (+)
Gene ID: HRGMv2_4372_1_84
Type: CAZyme
Location: 102610 - 103716 (+)
Gene ID: HRGMv2_4372_1_85
Type: pfam
Location: 103826 - 104767 (+)
Gene ID: HRGMv2_4372_1_86
Type: CAZyme
Location: 104901 - 106367 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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