Cluster: HRGMv2_4372_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4372
- CGC Family ID: CGCFAM_01428
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4372_33 | HRGMv2_4372_33_5 | 9553 | 13515 | - | GH141 | GH141 |
| CAZyme | HRGMv2_4372_33 | HRGMv2_4372_33_6 | 13583 | 16963 | - | CE17 |
| CAZyme | HRGMv2_4372_33 | HRGMv2_4372_33_7 | 17095 | 19467 | - | GH141 | GH141 |
| pfam | HRGMv2_4372_33 | HRGMv2_4372_33_8 | 19485 | 23822 | - | SLH | SLH | SLH |
| STP | HRGMv2_4372_33 | HRGMv2_4372_33_9 | 23854 | 25374 | - | SBP_bac_1 |
| TC | HRGMv2_4372_33 | HRGMv2_4372_33_10 | 25457 | 26338 | - | 3.A.1.1.29 |
| TC | HRGMv2_4372_33 | HRGMv2_4372_33_11 | 26350 | 27303 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_4372_33_5
Type: CAZyme
Location: 9553 - 13515 (-)
Type: CAZyme
Location: 9553 - 13515 (-)
Gene ID: HRGMv2_4372_33_6
Type: CAZyme
Location: 13583 - 16963 (-)
Type: CAZyme
Location: 13583 - 16963 (-)
Gene ID: HRGMv2_4372_33_7
Type: CAZyme
Location: 17095 - 19467 (-)
Type: CAZyme
Location: 17095 - 19467 (-)
Gene ID: HRGMv2_4372_33_8
Type: pfam
Location: 19485 - 23822 (-)
Type: pfam
Location: 19485 - 23822 (-)
Gene ID: HRGMv2_4372_33_9
Type: STP
Location: 23854 - 25374 (-)
Type: STP
Location: 23854 - 25374 (-)
Gene ID: HRGMv2_4372_33_10
Type: TC
Location: 25457 - 26338 (-)
Type: TC
Location: 25457 - 26338 (-)
Gene ID: HRGMv2_4372_33_11
Type: TC
Location: 26350 - 27303 (-)
Type: TC
Location: 26350 - 27303 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Ornithomonoglobus_A
Species
Ornithomonoglobus_A sp959602045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.