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Cluster: HRGMv2_4372_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4372_25 HRGMv2_4372_25_1 363 2438 - 3.A.3.32.7
pfam HRGMv2_4372_25 HRGMv2_4372_25_2 2459 2692 - DUF6110
TC HRGMv2_4372_25 HRGMv2_4372_25_3 2855 3628 - 3.A.1.34.1
TC HRGMv2_4372_25 HRGMv2_4372_25_4 3621 4514 - 3.A.1.34.1
TC HRGMv2_4372_25 HRGMv2_4372_25_5 4588 5598 - 3.A.1.34.1
TC HRGMv2_4372_25 HRGMv2_4372_25_6 5869 6648 - 3.A.1.3.24
TC HRGMv2_4372_25 HRGMv2_4372_25_7 6652 7299 - 3.A.1.3.14
TC HRGMv2_4372_25 HRGMv2_4372_25_8 7322 8152 - 3.A.1.3.15
CAZyme HRGMv2_4372_25 HRGMv2_4372_25_9 8380 11148 + GT51
Gene ID: HRGMv2_4372_25_1
Type: TC
Location: 363 - 2438 (-)
Gene ID: HRGMv2_4372_25_2
Type: pfam
Location: 2459 - 2692 (-)
Gene ID: HRGMv2_4372_25_3
Type: TC
Location: 2855 - 3628 (-)
Gene ID: HRGMv2_4372_25_4
Type: TC
Location: 3621 - 4514 (-)
Gene ID: HRGMv2_4372_25_5
Type: TC
Location: 4588 - 5598 (-)
Gene ID: HRGMv2_4372_25_6
Type: TC
Location: 5869 - 6648 (-)
Gene ID: HRGMv2_4372_25_7
Type: TC
Location: 6652 - 7299 (-)
Gene ID: HRGMv2_4372_25_8
Type: TC
Location: 7322 - 8152 (-)
Gene ID: HRGMv2_4372_25_9
Type: CAZyme
Location: 8380 - 11148 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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