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Cluster: HRGMv2_4372_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4372_19 HRGMv2_4372_19_14 13289 15061 - 8.A.59.2.1
TF HRGMv2_4372_19 HRGMv2_4372_19_15 15103 16122 - HTH_AraC
TC HRGMv2_4372_19 HRGMv2_4372_19_16 16393 17346 + 3.A.1.1.29
TC HRGMv2_4372_19 HRGMv2_4372_19_17 17362 18252 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_4372_19 HRGMv2_4372_19_18 18405 20954 + NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_4372_19 HRGMv2_4372_19_19 20921 23071 + S1_50
CAZyme HRGMv2_4372_19 HRGMv2_4372_19_20 23374 26052 + GH141 | GH141
Gene ID: HRGMv2_4372_19_14
Type: TC
Location: 13289 - 15061 (-)
Gene ID: HRGMv2_4372_19_15
Type: TF
Location: 15103 - 16122 (-)
Gene ID: HRGMv2_4372_19_16
Type: TC
Location: 16393 - 17346 (+)
Gene ID: HRGMv2_4372_19_17
Type: TC
Location: 17362 - 18252 (+)
Gene ID: HRGMv2_4372_19_18
Type:
Location: 18405 - 20954 (+)
Gene ID: HRGMv2_4372_19_19
Type: sulfatase
Location: 20921 - 23071 (+)
Gene ID: HRGMv2_4372_19_20
Type: CAZyme
Location: 23374 - 26052 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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