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Cluster: HRGMv2_4372_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4372_11 HRGMv2_4372_11_33 47832 49499 - PL33_2
NULL(UNKNOWN) HRGMv2_4372_11 HRGMv2_4372_11_34 49513 49983 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4372_11 HRGMv2_4372_11_35 50021 50809 - 3.A.1.11.1
TC HRGMv2_4372_11 HRGMv2_4372_11_36 50861 51709 - 3.A.1.11.1
TC HRGMv2_4372_11 HRGMv2_4372_11_37 51699 52892 - 3.A.1.11.1
pfam HRGMv2_4372_11 HRGMv2_4372_11_38 52876 53214 - P-II
TC HRGMv2_4372_11 HRGMv2_4372_11_39 53524 54591 - 3.A.1.11.1
Gene ID: HRGMv2_4372_11_33
Type: CAZyme
Location: 47832 - 49499 (-)
Gene ID: HRGMv2_4372_11_34
Type:
Location: 49513 - 49983 (-)
Gene ID: HRGMv2_4372_11_35
Type: TC
Location: 50021 - 50809 (-)
Gene ID: HRGMv2_4372_11_36
Type: TC
Location: 50861 - 51709 (-)
Gene ID: HRGMv2_4372_11_37
Type: TC
Location: 51699 - 52892 (-)
Gene ID: HRGMv2_4372_11_38
Type: pfam
Location: 52876 - 53214 (-)
Gene ID: HRGMv2_4372_11_39
Type: TC
Location: 53524 - 54591 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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