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Cluster: HRGMv2_4372_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4372_8 HRGMv2_4372_8_13 20607 21461 - 3.A.1.1.36
TC HRGMv2_4372_8 HRGMv2_4372_8_14 21474 22403 - 3.A.1.1.7
TF HRGMv2_4372_8 HRGMv2_4372_8_15 22653 24248 - HTH_AraC
TC HRGMv2_4372_8 HRGMv2_4372_8_16 24251 26011 - 9.B.33.1.2
CAZyme HRGMv2_4372_8 HRGMv2_4372_8_17 26257 29862 - CBM32
TF HRGMv2_4372_8 HRGMv2_4372_8_18 29992 30918 - HTH_1
TC HRGMv2_4372_8 HRGMv2_4372_8_19 31056 31913 + 2.A.115.1.5
Gene ID: HRGMv2_4372_8_13
Type: TC
Location: 20607 - 21461 (-)
Gene ID: HRGMv2_4372_8_14
Type: TC
Location: 21474 - 22403 (-)
Gene ID: HRGMv2_4372_8_15
Type: TF
Location: 22653 - 24248 (-)
Gene ID: HRGMv2_4372_8_16
Type: TC
Location: 24251 - 26011 (-)
Gene ID: HRGMv2_4372_8_17
Type: CAZyme
Location: 26257 - 29862 (-)
Gene ID: HRGMv2_4372_8_18
Type: TF
Location: 29992 - 30918 (-)
Gene ID: HRGMv2_4372_8_19
Type: TC
Location: 31056 - 31913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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