Cluster: HRGMv2_4371_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4371
- CGC Family ID: CGCFAM_00141
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4371_14 | HRGMv2_4371_14_9 | 8936 | 11077 | + | CBM67 | GH78 |
| TF | HRGMv2_4371_14 | HRGMv2_4371_14_10 | 11201 | 13408 | - | HTH_AraC |
| TC | HRGMv2_4371_14 | HRGMv2_4371_14_11 | 13640 | 14590 | + | 3.A.1.1.10 |
| TC | HRGMv2_4371_14 | HRGMv2_4371_14_12 | 14604 | 15479 | + | 3.A.1.1.10 |
| TC | HRGMv2_4371_14 | HRGMv2_4371_14_13 | 15546 | 17084 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_4371_14_9
Type: CAZyme
Location: 8936 - 11077 (+)
Type: CAZyme
Location: 8936 - 11077 (+)
Gene ID: HRGMv2_4371_14_10
Type: TF
Location: 11201 - 13408 (-)
Type: TF
Location: 11201 - 13408 (-)
Gene ID: HRGMv2_4371_14_11
Type: TC
Location: 13640 - 14590 (+)
Type: TC
Location: 13640 - 14590 (+)
Gene ID: HRGMv2_4371_14_12
Type: TC
Location: 14604 - 15479 (+)
Type: TC
Location: 14604 - 15479 (+)
Gene ID: HRGMv2_4371_14_13
Type: TC
Location: 15546 - 17084 (+)
Type: TC
Location: 15546 - 17084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Avimonoglobus
Species
Avimonoglobus intestinipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.