Cluster: HRGMv2_4371_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4371
- CGC Family ID: CGCFAM_00347
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4371_13 | HRGMv2_4371_13_2 | 1796 | 4399 | - | 8.A.59.2.1 |
| TF | HRGMv2_4371_13 | HRGMv2_4371_13_3 | 4396 | 5673 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4371_13 | HRGMv2_4371_13_4 | 5666 | 8332 | - | GH28 |
| NULL(UNKNOWN) | HRGMv2_4371_13 | HRGMv2_4371_13_5 | 8347 | 11322 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4371_13 | HRGMv2_4371_13_6 | 11342 | 14617 | - | SLH | SLH | SLH |
| TC | HRGMv2_4371_13 | HRGMv2_4371_13_7 | 14632 | 15465 | - | 3.A.1.1.11 |
| TC | HRGMv2_4371_13 | HRGMv2_4371_13_8 | 15474 | 16436 | - | 3.A.1.1.25 |
Gene ID: HRGMv2_4371_13_2
Type: TC
Location: 1796 - 4399 (-)
Type: TC
Location: 1796 - 4399 (-)
Gene ID: HRGMv2_4371_13_3
Type: TF
Location: 4396 - 5673 (-)
Type: TF
Location: 4396 - 5673 (-)
Gene ID: HRGMv2_4371_13_4
Type: CAZyme
Location: 5666 - 8332 (-)
Type: CAZyme
Location: 5666 - 8332 (-)
Gene ID: HRGMv2_4371_13_5
Type:
Location: 8347 - 11322 (-)
Type:
Location: 8347 - 11322 (-)
Gene ID: HRGMv2_4371_13_6
Type: pfam
Location: 11342 - 14617 (-)
Type: pfam
Location: 11342 - 14617 (-)
Gene ID: HRGMv2_4371_13_7
Type: TC
Location: 14632 - 15465 (-)
Type: TC
Location: 14632 - 15465 (-)
Gene ID: HRGMv2_4371_13_8
Type: TC
Location: 15474 - 16436 (-)
Type: TC
Location: 15474 - 16436 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Avimonoglobus
Species
Avimonoglobus intestinipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.