Cluster: HRGMv2_4371_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4371
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4371_9 | HRGMv2_4371_9_1 | 3 | 1052 | + | 3.A.3.6.10 |
| pfam | HRGMv2_4371_9 | HRGMv2_4371_9_2 | 1179 | 1922 | + | TraX |
| CAZyme | HRGMv2_4371_9 | HRGMv2_4371_9_3 | 1925 | 3001 | - | GH172 |
Gene ID: HRGMv2_4371_9_1
Type: TC
Location: 3 - 1052 (+)
Type: TC
Location: 3 - 1052 (+)
Gene ID: HRGMv2_4371_9_2
Type: pfam
Location: 1179 - 1922 (+)
Type: pfam
Location: 1179 - 1922 (+)
Gene ID: HRGMv2_4371_9_3
Type: CAZyme
Location: 1925 - 3001 (-)
Type: CAZyme
Location: 1925 - 3001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Avimonoglobus
Species
Avimonoglobus intestinipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.