Cluster: HRGMv2_4371_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4371
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4371_68 | HRGMv2_4371_68_1 | 3 | 545 | + | 9.B.174.1.1 |
| CAZyme | HRGMv2_4371_68 | HRGMv2_4371_68_2 | 626 | 1717 | + | CE15 |
| TF | HRGMv2_4371_68 | HRGMv2_4371_68_3 | 1862 | 2302 | + | MarR |
| pfam | HRGMv2_4371_68 | HRGMv2_4371_68_4 | 2361 | 2696 | + | HEAT_PBS | HEAT_2 |
| TC | HRGMv2_4371_68 | HRGMv2_4371_68_5 | 2715 | 4475 | + | 3.A.1.135.5 |
| TC | HRGMv2_4371_68 | HRGMv2_4371_68_6 | 4438 | 6321 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4371_68_1
Type: TC
Location: 3 - 545 (+)
Type: TC
Location: 3 - 545 (+)
Gene ID: HRGMv2_4371_68_2
Type: CAZyme
Location: 626 - 1717 (+)
Type: CAZyme
Location: 626 - 1717 (+)
Gene ID: HRGMv2_4371_68_3
Type: TF
Location: 1862 - 2302 (+)
Type: TF
Location: 1862 - 2302 (+)
Gene ID: HRGMv2_4371_68_4
Type: pfam
Location: 2361 - 2696 (+)
Type: pfam
Location: 2361 - 2696 (+)
Gene ID: HRGMv2_4371_68_5
Type: TC
Location: 2715 - 4475 (+)
Type: TC
Location: 2715 - 4475 (+)
Gene ID: HRGMv2_4371_68_6
Type: TC
Location: 4438 - 6321 (+)
Type: TC
Location: 4438 - 6321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Avimonoglobus
Species
Avimonoglobus intestinipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.