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Cluster: HRGMv2_4371_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4371_38 HRGMv2_4371_38_1 36 1241 + 2.A.102.4.10
TC HRGMv2_4371_38 HRGMv2_4371_38_2 1513 2223 - 3.A.1.4.10
TC HRGMv2_4371_38 HRGMv2_4371_38_3 2240 2998 - 3.A.1.4.10
TC HRGMv2_4371_38 HRGMv2_4371_38_4 2998 3966 - 3.A.1.4.8
TC HRGMv2_4371_38 HRGMv2_4371_38_5 3968 4867 - 3.A.1.4.10
TC HRGMv2_4371_38 HRGMv2_4371_38_6 5008 6135 - 3.A.1.4.10
CAZyme HRGMv2_4371_38 HRGMv2_4371_38_7 6242 8392 - CBM67 | GH78
Gene ID: HRGMv2_4371_38_1
Type: TC
Location: 36 - 1241 (+)
Gene ID: HRGMv2_4371_38_2
Type: TC
Location: 1513 - 2223 (-)
Gene ID: HRGMv2_4371_38_3
Type: TC
Location: 2240 - 2998 (-)
Gene ID: HRGMv2_4371_38_4
Type: TC
Location: 2998 - 3966 (-)
Gene ID: HRGMv2_4371_38_5
Type: TC
Location: 3968 - 4867 (-)
Gene ID: HRGMv2_4371_38_6
Type: TC
Location: 5008 - 6135 (-)
Gene ID: HRGMv2_4371_38_7
Type: CAZyme
Location: 6242 - 8392 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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