Cluster: HRGMv2_4369_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4369
- CGC Family ID: CGCFAM_00004
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4369_6 | HRGMv2_4369_6_40 | 43275 | 43877 | + | 2.A.115.2.14 |
| pfam | HRGMv2_4369_6 | HRGMv2_4369_6_41 | 43944 | 44483 | - | Zn_Ribbon_1 |
| CAZyme | HRGMv2_4369_6 | HRGMv2_4369_6_42 | 44705 | 46552 | + | GH13_9 |
| pfam | HRGMv2_4369_6 | HRGMv2_4369_6_43 | 46545 | 47750 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_4369_6 | HRGMv2_4369_6_44 | 47750 | 48868 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_4369_6 | HRGMv2_4369_6_45 | 48933 | 50390 | + | GT5 |
| CAZyme | HRGMv2_4369_6 | HRGMv2_4369_6_46 | 50402 | 52828 | + | GT35 |
Gene ID: HRGMv2_4369_6_40
Type: TC
Location: 43275 - 43877 (+)
Type: TC
Location: 43275 - 43877 (+)
Gene ID: HRGMv2_4369_6_41
Type: pfam
Location: 43944 - 44483 (-)
Type: pfam
Location: 43944 - 44483 (-)
Gene ID: HRGMv2_4369_6_42
Type: CAZyme
Location: 44705 - 46552 (+)
Type: CAZyme
Location: 44705 - 46552 (+)
Gene ID: HRGMv2_4369_6_43
Type: pfam
Location: 46545 - 47750 (+)
Type: pfam
Location: 46545 - 47750 (+)
Gene ID: HRGMv2_4369_6_44
Type: pfam
Location: 47750 - 48868 (+)
Type: pfam
Location: 47750 - 48868 (+)
Gene ID: HRGMv2_4369_6_45
Type: CAZyme
Location: 48933 - 50390 (+)
Type: CAZyme
Location: 48933 - 50390 (+)
Gene ID: HRGMv2_4369_6_46
Type: CAZyme
Location: 50402 - 52828 (+)
Type: CAZyme
Location: 50402 - 52828 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.