Cluster: HRGMv2_4369_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4369
- CGC Family ID: CGCFAM_02227
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4369_16 | HRGMv2_4369_16_3 | 1724 | 3532 | + | GH20 |
| NULL(UNKNOWN) | HRGMv2_4369_16 | HRGMv2_4369_16_4 | 3529 | 6972 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4369_16 | HRGMv2_4369_16_5 | 6987 | 8450 | + | 3.A.1.1.34 |
| TC | HRGMv2_4369_16 | HRGMv2_4369_16_6 | 8452 | 9477 | + | 3.A.1.1.39 |
| pfam | HRGMv2_4369_16 | HRGMv2_4369_16_7 | 9487 | 12435 | + | Yip1 |
| pfam | HRGMv2_4369_16 | HRGMv2_4369_16_8 | 12450 | 15596 | + | DUF5696 |
| TC | HRGMv2_4369_16 | HRGMv2_4369_16_9 | 15607 | 16683 | + | 3.A.1.1.25 |
| TC | HRGMv2_4369_16 | HRGMv2_4369_16_10 | 16667 | 17833 | + | 3.A.1.1.24 |
Gene ID: HRGMv2_4369_16_3
Type: CAZyme
Location: 1724 - 3532 (+)
Type: CAZyme
Location: 1724 - 3532 (+)
Gene ID: HRGMv2_4369_16_4
Type:
Location: 3529 - 6972 (+)
Type:
Location: 3529 - 6972 (+)
Gene ID: HRGMv2_4369_16_5
Type: TC
Location: 6987 - 8450 (+)
Type: TC
Location: 6987 - 8450 (+)
Gene ID: HRGMv2_4369_16_6
Type: TC
Location: 8452 - 9477 (+)
Type: TC
Location: 8452 - 9477 (+)
Gene ID: HRGMv2_4369_16_7
Type: pfam
Location: 9487 - 12435 (+)
Type: pfam
Location: 9487 - 12435 (+)
Gene ID: HRGMv2_4369_16_8
Type: pfam
Location: 12450 - 15596 (+)
Type: pfam
Location: 12450 - 15596 (+)
Gene ID: HRGMv2_4369_16_9
Type: TC
Location: 15607 - 16683 (+)
Type: TC
Location: 15607 - 16683 (+)
Gene ID: HRGMv2_4369_16_10
Type: TC
Location: 16667 - 17833 (+)
Type: TC
Location: 16667 - 17833 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.