Cluster: HRGMv2_4369_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4369
- CGC Family ID: CGCFAM_01100
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4369_15 | HRGMv2_4369_15_29 | 26823 | 27959 | + | CE9 |
| NULL(UNKNOWN) | HRGMv2_4369_15 | HRGMv2_4369_15_30 | 28182 | 28868 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4369_15 | HRGMv2_4369_15_31 | 28873 | 29586 | + | 3.A.1.147.6 |
| TC | HRGMv2_4369_15 | HRGMv2_4369_15_32 | 29579 | 31174 | + | 3.A.1.147.6 |
| NULL(UNKNOWN) | HRGMv2_4369_15 | HRGMv2_4369_15_33 | 31294 | 31944 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4369_15 | HRGMv2_4369_15_34 | 31973 | 32845 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4369_15 | HRGMv2_4369_15_35 | 32826 | 33449 | + | 3.A.1.15.6 |
Gene ID: HRGMv2_4369_15_29
Type: CAZyme
Location: 26823 - 27959 (+)
Type: CAZyme
Location: 26823 - 27959 (+)
Gene ID: HRGMv2_4369_15_30
Type:
Location: 28182 - 28868 (+)
Type:
Location: 28182 - 28868 (+)
Gene ID: HRGMv2_4369_15_31
Type: TC
Location: 28873 - 29586 (+)
Type: TC
Location: 28873 - 29586 (+)
Gene ID: HRGMv2_4369_15_32
Type: TC
Location: 29579 - 31174 (+)
Type: TC
Location: 29579 - 31174 (+)
Gene ID: HRGMv2_4369_15_33
Type:
Location: 31294 - 31944 (+)
Type:
Location: 31294 - 31944 (+)
Gene ID: HRGMv2_4369_15_34
Type:
Location: 31973 - 32845 (+)
Type:
Location: 31973 - 32845 (+)
Gene ID: HRGMv2_4369_15_35
Type: TC
Location: 32826 - 33449 (+)
Type: TC
Location: 32826 - 33449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.