Cluster: HRGMv2_4369_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4369
- CGC Family ID: CGCFAM_06138
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4369_1 | HRGMv2_4369_1_114 | 138565 | 141201 | + | 8.A.7.1.5 |
| TC | HRGMv2_4369_1 | HRGMv2_4369_1_115 | 141658 | 142359 | + | 3.A.1.122.7 |
| pfam | HRGMv2_4369_1 | HRGMv2_4369_1_116 | 142372 | 144648 | + | FtsX | FtsX |
| TF | HRGMv2_4369_1 | HRGMv2_4369_1_117 | 145249 | 145884 | - | HTH_3 |
| CAZyme | HRGMv2_4369_1 | HRGMv2_4369_1_118 | 146109 | 147047 | + | GT8 |
Gene ID: HRGMv2_4369_1_114
Type: TC
Location: 138565 - 141201 (+)
Type: TC
Location: 138565 - 141201 (+)
Gene ID: HRGMv2_4369_1_115
Type: TC
Location: 141658 - 142359 (+)
Type: TC
Location: 141658 - 142359 (+)
Gene ID: HRGMv2_4369_1_116
Type: pfam
Location: 142372 - 144648 (+)
Type: pfam
Location: 142372 - 144648 (+)
Gene ID: HRGMv2_4369_1_117
Type: TF
Location: 145249 - 145884 (-)
Type: TF
Location: 145249 - 145884 (-)
Gene ID: HRGMv2_4369_1_118
Type: CAZyme
Location: 146109 - 147047 (+)
Type: CAZyme
Location: 146109 - 147047 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.