Cluster: HRGMv2_4368_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4368
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4368_2 | HRGMv2_4368_2_23 | 24016 | 25614 | + | AA4 |
| NULL(UNKNOWN) | HRGMv2_4368_2 | HRGMv2_4368_2_24 | 25800 | 26399 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4368_2 | HRGMv2_4368_2_25 | 26392 | 27291 | - | Mrr_cat | Mrr_cat_2 | Mrr_N | NA-iREase1 |
| TC | HRGMv2_4368_2 | HRGMv2_4368_2_26 | 27658 | 30084 | - | 3.A.3.5.18 |
Gene ID: HRGMv2_4368_2_23
Type: CAZyme
Location: 24016 - 25614 (+)
Type: CAZyme
Location: 24016 - 25614 (+)
Gene ID: HRGMv2_4368_2_24
Type:
Location: 25800 - 26399 (-)
Type:
Location: 25800 - 26399 (-)
Gene ID: HRGMv2_4368_2_25
Type: pfam
Location: 26392 - 27291 (-)
Type: pfam
Location: 26392 - 27291 (-)
Gene ID: HRGMv2_4368_2_26
Type: TC
Location: 27658 - 30084 (-)
Type: TC
Location: 27658 - 30084 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Methanomassiliicoccales
Family
Methanomassiliicoccaceae
Genus
Methanomassiliicoccus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.