Cluster: HRGMv2_4364_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4364
- CGC Family ID: CGCFAM_05593
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4364_14 | HRGMv2_4364_14_20 | 14731 | 15384 | + | 9.B.149.1.8 |
| CAZyme | HRGMv2_4364_14 | HRGMv2_4364_14_21 | 15521 | 16954 | - | AA4 |
| pfam | HRGMv2_4364_14 | HRGMv2_4364_14_22 | 17000 | 17707 | + | ADK | ADK_lid | AAA_17 | AAA_18 |
| TC | HRGMv2_4364_14 | HRGMv2_4364_14_23 | 17968 | 18348 | + | 1.A.43.1.2 |
Gene ID: HRGMv2_4364_14_20
Type: TC
Location: 14731 - 15384 (+)
Type: TC
Location: 14731 - 15384 (+)
Gene ID: HRGMv2_4364_14_21
Type: CAZyme
Location: 15521 - 16954 (-)
Type: CAZyme
Location: 15521 - 16954 (-)
Gene ID: HRGMv2_4364_14_22
Type: pfam
Location: 17000 - 17707 (+)
Type: pfam
Location: 17000 - 17707 (+)
Gene ID: HRGMv2_4364_14_23
Type: TC
Location: 17968 - 18348 (+)
Type: TC
Location: 17968 - 18348 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Methanomassiliicoccales
Family
Methanomethylophilaceae
Genus
Methanogranum
Species
Methanogranum sp002506905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.