Cluster: HRGMv2_4358_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4358
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4358_2 | HRGMv2_4358_2_77 | 83561 | 84985 | - | GH1 |
| TF | HRGMv2_4358_2 | HRGMv2_4358_2_78 | 85160 | 85873 | + | GntR |
| TC | HRGMv2_4358_2 | HRGMv2_4358_2_79 | 86043 | 87362 | + | 4.A.3.2.9 |
| TC | HRGMv2_4358_2 | HRGMv2_4358_2_80 | 87652 | 88212 | + | 2.A.88.3.3 |
| TF | HRGMv2_4358_2 | HRGMv2_4358_2_81 | 88280 | 89116 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4358_2 | HRGMv2_4358_2_82 | 89252 | 90994 | + | 3.A.1.106.3 |
| TC | HRGMv2_4358_2 | HRGMv2_4358_2_83 | 90994 | 92775 | + | 3.A.1.106.3 |
| NULL(UNKNOWN) | HRGMv2_4358_2 | HRGMv2_4358_2_84 | 93213 | 93362 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4358_2 | HRGMv2_4358_2_85 | 93477 | 93779 | - | DUF2316 |
| TC | HRGMv2_4358_2 | HRGMv2_4358_2_86 | 93950 | 94684 | + | 3.A.1.128.5 |
| NULL(UNKNOWN) | HRGMv2_4358_2 | HRGMv2_4358_2_87 | 94688 | 96331 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4358_2 | HRGMv2_4358_2_88 | 96519 | 96719 | + | CSD |
| TC | HRGMv2_4358_2 | HRGMv2_4358_2_89 | 96992 | 98287 | + | 9.B.14.1.13 |
Gene ID: HRGMv2_4358_2_77
Type: CAZyme
Location: 83561 - 84985 (-)
Type: CAZyme
Location: 83561 - 84985 (-)
Gene ID: HRGMv2_4358_2_78
Type: TF
Location: 85160 - 85873 (+)
Type: TF
Location: 85160 - 85873 (+)
Gene ID: HRGMv2_4358_2_79
Type: TC
Location: 86043 - 87362 (+)
Type: TC
Location: 86043 - 87362 (+)
Gene ID: HRGMv2_4358_2_80
Type: TC
Location: 87652 - 88212 (+)
Type: TC
Location: 87652 - 88212 (+)
Gene ID: HRGMv2_4358_2_81
Type: TF
Location: 88280 - 89116 (-)
Type: TF
Location: 88280 - 89116 (-)
Gene ID: HRGMv2_4358_2_82
Type: TC
Location: 89252 - 90994 (+)
Type: TC
Location: 89252 - 90994 (+)
Gene ID: HRGMv2_4358_2_83
Type: TC
Location: 90994 - 92775 (+)
Type: TC
Location: 90994 - 92775 (+)
Gene ID: HRGMv2_4358_2_84
Type:
Location: 93213 - 93362 (-)
Type:
Location: 93213 - 93362 (-)
Gene ID: HRGMv2_4358_2_85
Type: pfam
Location: 93477 - 93779 (-)
Type: pfam
Location: 93477 - 93779 (-)
Gene ID: HRGMv2_4358_2_86
Type: TC
Location: 93950 - 94684 (+)
Type: TC
Location: 93950 - 94684 (+)
Gene ID: HRGMv2_4358_2_87
Type:
Location: 94688 - 96331 (+)
Type:
Location: 94688 - 96331 (+)
Gene ID: HRGMv2_4358_2_88
Type: TF
Location: 96519 - 96719 (+)
Type: TF
Location: 96519 - 96719 (+)
Gene ID: HRGMv2_4358_2_89
Type: TC
Location: 96992 - 98287 (+)
Type: TC
Location: 96992 - 98287 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_B
Species
Enterococcus_B thailandicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.