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Cluster: HRGMv2_4358_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4358_19 HRGMv2_4358_19_2 1673 3148 + 2.A.1.3.33
CAZyme HRGMv2_4358_19 HRGMv2_4358_19_3 3167 3955 + CE1
STP HRGMv2_4358_19 HRGMv2_4358_19_4 4006 4662 - TetR_C | TetR_N
TC HRGMv2_4358_19 HRGMv2_4358_19_5 4813 6489 + 3.A.1.135.8
TC HRGMv2_4358_19 HRGMv2_4358_19_6 6493 8262 + 3.A.1.135.8
pfam HRGMv2_4358_19 HRGMv2_4358_19_7 8328 8912 - PCMT | rRNA_methylase | Methyltransf_31
pfam HRGMv2_4358_19 HRGMv2_4358_19_8 8913 9869 - Radical_SAM | Radical_SAM_C
TC HRGMv2_4358_19 HRGMv2_4358_19_9 9896 10528 - 9.B.105.2.1
CAZyme HRGMv2_4358_19 HRGMv2_4358_19_10 10873 12906 + GH73
Gene ID: HRGMv2_4358_19_2
Type: TC
Location: 1673 - 3148 (+)
Gene ID: HRGMv2_4358_19_3
Type: CAZyme
Location: 3167 - 3955 (+)
Gene ID: HRGMv2_4358_19_4
Type: STP
Location: 4006 - 4662 (-)
Gene ID: HRGMv2_4358_19_5
Type: TC
Location: 4813 - 6489 (+)
Gene ID: HRGMv2_4358_19_6
Type: TC
Location: 6493 - 8262 (+)
Gene ID: HRGMv2_4358_19_7
Type: pfam
Location: 8328 - 8912 (-)
Gene ID: HRGMv2_4358_19_8
Type: pfam
Location: 8913 - 9869 (-)
Gene ID: HRGMv2_4358_19_9
Type: TC
Location: 9896 - 10528 (-)
Gene ID: HRGMv2_4358_19_10
Type: CAZyme
Location: 10873 - 12906 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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