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Cluster: HRGMv2_4358_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4358_14 HRGMv2_4358_14_13 12637 13590 - 3.A.1.5.19
TC HRGMv2_4358_14 HRGMv2_4358_14_14 13565 14641 - 3.A.1.5.25
TC HRGMv2_4358_14 HRGMv2_4358_14_15 14647 15690 - 3.A.1.5.19
TC HRGMv2_4358_14 HRGMv2_4358_14_16 15691 16632 - 3.A.1.5.19
pfam HRGMv2_4358_14 HRGMv2_4358_14_17 16717 17061 + DUF3899
TC HRGMv2_4358_14 HRGMv2_4358_14_18 17145 18809 - 3.A.1.5.19
pfam HRGMv2_4358_14 HRGMv2_4358_14_19 19130 19675 - Acetyltransf_1 | Acetyltransf_7
pfam HRGMv2_4358_14 HRGMv2_4358_14_20 19821 20897 - Radical_SAM | RlmN_N
TC HRGMv2_4358_14 HRGMv2_4358_14_21 21090 23534 - 3.A.12.1.1
CAZyme HRGMv2_4358_14 HRGMv2_4358_14_22 23794 25233 - GH1
Gene ID: HRGMv2_4358_14_13
Type: TC
Location: 12637 - 13590 (-)
Gene ID: HRGMv2_4358_14_14
Type: TC
Location: 13565 - 14641 (-)
Gene ID: HRGMv2_4358_14_15
Type: TC
Location: 14647 - 15690 (-)
Gene ID: HRGMv2_4358_14_16
Type: TC
Location: 15691 - 16632 (-)
Gene ID: HRGMv2_4358_14_17
Type: pfam
Location: 16717 - 17061 (+)
Gene ID: HRGMv2_4358_14_18
Type: TC
Location: 17145 - 18809 (-)
Gene ID: HRGMv2_4358_14_19
Type: pfam
Location: 19130 - 19675 (-)
Gene ID: HRGMv2_4358_14_20
Type: pfam
Location: 19821 - 20897 (-)
Gene ID: HRGMv2_4358_14_21
Type: TC
Location: 21090 - 23534 (-)
Gene ID: HRGMv2_4358_14_22
Type: CAZyme
Location: 23794 - 25233 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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