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Cluster: HRGMv2_4358_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4358_1 HRGMv2_4358_1_118 110419 111933 + 3.D.10.1.6
TF HRGMv2_4358_1 HRGMv2_4358_1_119 112472 113188 - GntR
TC HRGMv2_4358_1 HRGMv2_4358_1_120 113347 114690 + 4.A.3.2.8
CAZyme HRGMv2_4358_1 HRGMv2_4358_1_121 114727 117363 + GH38
CAZyme HRGMv2_4358_1 HRGMv2_4358_1_122 117368 118657 + GH125
CAZyme HRGMv2_4358_1 HRGMv2_4358_1_123 118711 119877 + GH18
pfam HRGMv2_4358_1 HRGMv2_4358_1_124 119922 120557 - Epimerase | NmrA | NAD_binding_10
NULL(UNKNOWN) HRGMv2_4358_1 HRGMv2_4358_1_125 120906 121580 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4358_1 HRGMv2_4358_1_126 122588 123223 - 2.A.87.2.3
Gene ID: HRGMv2_4358_1_118
Type: TC
Location: 110419 - 111933 (+)
Gene ID: HRGMv2_4358_1_119
Type: TF
Location: 112472 - 113188 (-)
Gene ID: HRGMv2_4358_1_120
Type: TC
Location: 113347 - 114690 (+)
Gene ID: HRGMv2_4358_1_121
Type: CAZyme
Location: 114727 - 117363 (+)
Gene ID: HRGMv2_4358_1_122
Type: CAZyme
Location: 117368 - 118657 (+)
Gene ID: HRGMv2_4358_1_123
Type: CAZyme
Location: 118711 - 119877 (+)
Gene ID: HRGMv2_4358_1_124
Type: pfam
Location: 119922 - 120557 (-)
Gene ID: HRGMv2_4358_1_125
Type:
Location: 120906 - 121580 (+)
Gene ID: HRGMv2_4358_1_126
Type: TC
Location: 122588 - 123223 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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