Cluster: HRGMv2_4358_CGC36
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4358
- CGC Family ID: CGCFAM_01400
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4358_8 | HRGMv2_4358_8_128 | 137134 | 137844 | - | 9.B.20.1.4 |
| TC | HRGMv2_4358_8 | HRGMv2_4358_8_129 | 137957 | 138763 | - | 4.A.6.1.13 |
| TC | HRGMv2_4358_8 | HRGMv2_4358_8_130 | 138750 | 139544 | - | 4.A.6.1.13 |
| TC | HRGMv2_4358_8 | HRGMv2_4358_8_131 | 139564 | 140490 | - | 4.A.6.1.15 |
| TF | HRGMv2_4358_8 | HRGMv2_4358_8_132 | 140720 | 141427 | + | GntR |
| CAZyme | HRGMv2_4358_8 | HRGMv2_4358_8_133 | 141557 | 142762 | + | GH88 |
| CAZyme | HRGMv2_4358_8 | HRGMv2_4358_8_134 | 142775 | 144574 | + | GH35 |
| NULL(UNKNOWN) | HRGMv2_4358_8 | HRGMv2_4358_8_135 | 145035 | 145868 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4358_8 | HRGMv2_4358_8_136 | 145855 | 147597 | - | GH154 |
| pfam | HRGMv2_4358_8 | HRGMv2_4358_8_137 | 148170 | 148871 | - | Glucosamine_iso |
| TC | HRGMv2_4358_8 | HRGMv2_4358_8_138 | 149108 | 150664 | + | 3.A.1.121.4 |
| TC | HRGMv2_4358_8 | HRGMv2_4358_8_139 | 150755 | 151936 | - | 2.A.1.36.3 |
Gene ID: HRGMv2_4358_8_128
Type: TC
Location: 137134 - 137844 (-)
Type: TC
Location: 137134 - 137844 (-)
Gene ID: HRGMv2_4358_8_129
Type: TC
Location: 137957 - 138763 (-)
Type: TC
Location: 137957 - 138763 (-)
Gene ID: HRGMv2_4358_8_130
Type: TC
Location: 138750 - 139544 (-)
Type: TC
Location: 138750 - 139544 (-)
Gene ID: HRGMv2_4358_8_131
Type: TC
Location: 139564 - 140490 (-)
Type: TC
Location: 139564 - 140490 (-)
Gene ID: HRGMv2_4358_8_132
Type: TF
Location: 140720 - 141427 (+)
Type: TF
Location: 140720 - 141427 (+)
Gene ID: HRGMv2_4358_8_133
Type: CAZyme
Location: 141557 - 142762 (+)
Type: CAZyme
Location: 141557 - 142762 (+)
Gene ID: HRGMv2_4358_8_134
Type: CAZyme
Location: 142775 - 144574 (+)
Type: CAZyme
Location: 142775 - 144574 (+)
Gene ID: HRGMv2_4358_8_135
Type:
Location: 145035 - 145868 (-)
Type:
Location: 145035 - 145868 (-)
Gene ID: HRGMv2_4358_8_136
Type: CAZyme
Location: 145855 - 147597 (-)
Type: CAZyme
Location: 145855 - 147597 (-)
Gene ID: HRGMv2_4358_8_137
Type: pfam
Location: 148170 - 148871 (-)
Type: pfam
Location: 148170 - 148871 (-)
Gene ID: HRGMv2_4358_8_138
Type: TC
Location: 149108 - 150664 (+)
Type: TC
Location: 149108 - 150664 (+)
Gene ID: HRGMv2_4358_8_139
Type: TC
Location: 150755 - 151936 (-)
Type: TC
Location: 150755 - 151936 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_B
Species
Enterococcus_B thailandicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.