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Cluster: HRGMv2_4358_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4358_8 HRGMv2_4358_8_44 47498 48271 - 3.A.1.3.2
TC HRGMv2_4358_8 HRGMv2_4358_8_45 48803 49648 - 3.A.1.24.2
TC HRGMv2_4358_8 HRGMv2_4358_8_46 49673 50359 - 3.A.1.24.2
TC HRGMv2_4358_8 HRGMv2_4358_8_47 50352 51386 - 3.A.1.24.2
pfam HRGMv2_4358_8 HRGMv2_4358_8_48 51789 52127 - Biotin_lipoyl | GCV_H
pfam HRGMv2_4358_8 HRGMv2_4358_8_49 52129 52485 - Glutaredoxin | ArsC
TC HRGMv2_4358_8 HRGMv2_4358_8_50 52490 53677 - 2.A.103.1.6
pfam HRGMv2_4358_8 HRGMv2_4358_8_51 53784 54311 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9
TF HRGMv2_4358_8 HRGMv2_4358_8_52 54295 55170 - HTH_1
TC HRGMv2_4358_8 HRGMv2_4358_8_53 55331 56374 + 2.A.98.1.3
pfam HRGMv2_4358_8 HRGMv2_4358_8_54 56465 56929 - DNA_binding_1 | Methyltransf_1N
CAZyme HRGMv2_4358_8 HRGMv2_4358_8_55 57216 58160 + GT2
Gene ID: HRGMv2_4358_8_44
Type: TC
Location: 47498 - 48271 (-)
Gene ID: HRGMv2_4358_8_45
Type: TC
Location: 48803 - 49648 (-)
Gene ID: HRGMv2_4358_8_46
Type: TC
Location: 49673 - 50359 (-)
Gene ID: HRGMv2_4358_8_47
Type: TC
Location: 50352 - 51386 (-)
Gene ID: HRGMv2_4358_8_48
Type: pfam
Location: 51789 - 52127 (-)
Gene ID: HRGMv2_4358_8_49
Type: pfam
Location: 52129 - 52485 (-)
Gene ID: HRGMv2_4358_8_50
Type: TC
Location: 52490 - 53677 (-)
Gene ID: HRGMv2_4358_8_51
Type: pfam
Location: 53784 - 54311 (-)
Gene ID: HRGMv2_4358_8_52
Type: TF
Location: 54295 - 55170 (-)
Gene ID: HRGMv2_4358_8_53
Type: TC
Location: 55331 - 56374 (+)
Gene ID: HRGMv2_4358_8_54
Type: pfam
Location: 56465 - 56929 (-)
Gene ID: HRGMv2_4358_8_55
Type: CAZyme
Location: 57216 - 58160 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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