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Cluster: HRGMv2_4358_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4358_1 HRGMv2_4358_1_58 52262 54910 + 3.A.3.4.1
CAZyme HRGMv2_4358_1 HRGMv2_4358_1_59 55124 56449 + GH73
pfam HRGMv2_4358_1 HRGMv2_4358_1_60 56687 57364 + Hydrolase | HAD_2
NULL(UNKNOWN) HRGMv2_4358_1 HRGMv2_4358_1_61 57245 57655 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4358_1 HRGMv2_4358_1_62 58011 59084 + 3.A.1.24.6
TC HRGMv2_4358_1 HRGMv2_4358_1_63 59086 59766 + 3.A.1.24.3
TC HRGMv2_4358_1 HRGMv2_4358_1_64 59782 60624 + 3.A.1.24.6
peptidase HRGMv2_4358_1 HRGMv2_4358_1_65 60654 61877 + M20.UPD
TC HRGMv2_4358_1 HRGMv2_4358_1_66 62262 63665 + 2.A.35.1.3
TC HRGMv2_4358_1 HRGMv2_4358_1_67 64038 65378 - 2.A.3.1.22
Gene ID: HRGMv2_4358_1_58
Type: TC
Location: 52262 - 54910 (+)
Gene ID: HRGMv2_4358_1_59
Type: CAZyme
Location: 55124 - 56449 (+)
Gene ID: HRGMv2_4358_1_60
Type: pfam
Location: 56687 - 57364 (+)
Gene ID: HRGMv2_4358_1_61
Type:
Location: 57245 - 57655 (-)
Gene ID: HRGMv2_4358_1_62
Type: TC
Location: 58011 - 59084 (+)
Gene ID: HRGMv2_4358_1_63
Type: TC
Location: 59086 - 59766 (+)
Gene ID: HRGMv2_4358_1_64
Type: TC
Location: 59782 - 60624 (+)
Gene ID: HRGMv2_4358_1_65
Type: peptidase
Location: 60654 - 61877 (+)
Gene ID: HRGMv2_4358_1_66
Type: TC
Location: 62262 - 63665 (+)
Gene ID: HRGMv2_4358_1_67
Type: TC
Location: 64038 - 65378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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