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Cluster: HRGMv2_4358_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4358_2 HRGMv2_4358_2_179 201223 201885 - 3.A.1.3.10
TC HRGMv2_4358_2 HRGMv2_4358_2_180 201885 202724 - 3.A.1.3.14
pfam HRGMv2_4358_2 HRGMv2_4358_2_181 202754 204187 - Amidase
CAZyme HRGMv2_4358_2 HRGMv2_4358_2_182 204347 206113 - GH2
CAZyme HRGMv2_4358_2 HRGMv2_4358_2_183 206106 207932 - GH2
NULL(UNKNOWN) HRGMv2_4358_2 HRGMv2_4358_2_184 207948 208358 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4358_2 HRGMv2_4358_2_185 208365 209201 - 3.A.1.1.36
TC HRGMv2_4358_2 HRGMv2_4358_2_186 209213 210121 - 3.A.1.1.20
Gene ID: HRGMv2_4358_2_179
Type: TC
Location: 201223 - 201885 (-)
Gene ID: HRGMv2_4358_2_180
Type: TC
Location: 201885 - 202724 (-)
Gene ID: HRGMv2_4358_2_181
Type: pfam
Location: 202754 - 204187 (-)
Gene ID: HRGMv2_4358_2_182
Type: CAZyme
Location: 204347 - 206113 (-)
Gene ID: HRGMv2_4358_2_183
Type: CAZyme
Location: 206106 - 207932 (-)
Gene ID: HRGMv2_4358_2_184
Type:
Location: 207948 - 208358 (-)
Gene ID: HRGMv2_4358_2_185
Type: TC
Location: 208365 - 209201 (-)
Gene ID: HRGMv2_4358_2_186
Type: TC
Location: 209213 - 210121 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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