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Cluster: HRGMv2_4357_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4357_26 HRGMv2_4357_26_5 2159 3583 - 2.A.2.3.3
CAZyme HRGMv2_4357_26 HRGMv2_4357_26_6 3619 5310 - GH13_31
TF HRGMv2_4357_26 HRGMv2_4357_26_7 5500 5823 - HTH_5
TC HRGMv2_4357_26 HRGMv2_4357_26_8 5907 6482 + 2.A.77.1.3
TC HRGMv2_4357_26 HRGMv2_4357_26_9 6921 7925 + 3.A.1.34.1
TC HRGMv2_4357_26 HRGMv2_4357_26_10 7922 8821 + 3.A.1.34.1
TC HRGMv2_4357_26 HRGMv2_4357_26_11 8814 9569 + 3.A.1.34.1
TC HRGMv2_4357_26 HRGMv2_4357_26_12 9694 11733 - 2.A.72.1.3
Gene ID: HRGMv2_4357_26_5
Type: TC
Location: 2159 - 3583 (-)
Gene ID: HRGMv2_4357_26_6
Type: CAZyme
Location: 3619 - 5310 (-)
Gene ID: HRGMv2_4357_26_7
Type: TF
Location: 5500 - 5823 (-)
Gene ID: HRGMv2_4357_26_8
Type: TC
Location: 5907 - 6482 (+)
Gene ID: HRGMv2_4357_26_9
Type: TC
Location: 6921 - 7925 (+)
Gene ID: HRGMv2_4357_26_10
Type: TC
Location: 7922 - 8821 (+)
Gene ID: HRGMv2_4357_26_11
Type: TC
Location: 8814 - 9569 (+)
Gene ID: HRGMv2_4357_26_12
Type: TC
Location: 9694 - 11733 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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