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Cluster: HRGMv2_4357_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4357_17 HRGMv2_4357_17_2 586 1632 + 9.B.141.1.3
TC HRGMv2_4357_17 HRGMv2_4357_17_3 1629 2411 + 9.B.141.1.2
NULL(UNKNOWN) HRGMv2_4357_17 HRGMv2_4357_17_4 2395 2697 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4357_17 HRGMv2_4357_17_5 2796 3191 + Imm33 | Imm33-like
CAZyme HRGMv2_4357_17 HRGMv2_4357_17_6 3411 4421 - GT113
TC HRGMv2_4357_17 HRGMv2_4357_17_7 4630 5694 + 3.A.1.2.12
TC HRGMv2_4357_17 HRGMv2_4357_17_8 5907 7355 + 3.A.1.3.25
TC HRGMv2_4357_17 HRGMv2_4357_17_9 7352 8107 + 3.A.1.3.25
TC HRGMv2_4357_17 HRGMv2_4357_17_10 8203 9636 + 3.A.1.3.25
Gene ID: HRGMv2_4357_17_2
Type: TC
Location: 586 - 1632 (+)
Gene ID: HRGMv2_4357_17_3
Type: TC
Location: 1629 - 2411 (+)
Gene ID: HRGMv2_4357_17_4
Type:
Location: 2395 - 2697 (+)
Gene ID: HRGMv2_4357_17_5
Type: pfam
Location: 2796 - 3191 (+)
Gene ID: HRGMv2_4357_17_6
Type: CAZyme
Location: 3411 - 4421 (-)
Gene ID: HRGMv2_4357_17_7
Type: TC
Location: 4630 - 5694 (+)
Gene ID: HRGMv2_4357_17_8
Type: TC
Location: 5907 - 7355 (+)
Gene ID: HRGMv2_4357_17_9
Type: TC
Location: 7352 - 8107 (+)
Gene ID: HRGMv2_4357_17_10
Type: TC
Location: 8203 - 9636 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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