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Cluster: HRGMv2_4357_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4357_14 HRGMv2_4357_14_1 3 692 - 3.A.3.2.21
pfam HRGMv2_4357_14 HRGMv2_4357_14_2 987 2831 - DUF2207 | DUF2207_C
pfam HRGMv2_4357_14 HRGMv2_4357_14_3 3012 3707 + DUF1275
TC HRGMv2_4357_14 HRGMv2_4357_14_4 4131 4982 + 3.A.1.24.6
TC HRGMv2_4357_14 HRGMv2_4357_14_5 5026 5868 + 3.A.1.24.6
peptidase HRGMv2_4357_14 HRGMv2_4357_14_6 5940 7271 + M20.UNF
TC HRGMv2_4357_14 HRGMv2_4357_14_7 7313 8392 + 3.A.1.24.6
TC HRGMv2_4357_14 HRGMv2_4357_14_8 8395 9090 + 3.A.1.24.6
TF HRGMv2_4357_14 HRGMv2_4357_14_9 9292 9999 - GntR
CAZyme HRGMv2_4357_14 HRGMv2_4357_14_10 9999 11165 - CE9
Gene ID: HRGMv2_4357_14_1
Type: TC
Location: 3 - 692 (-)
Gene ID: HRGMv2_4357_14_2
Type: pfam
Location: 987 - 2831 (-)
Gene ID: HRGMv2_4357_14_3
Type: pfam
Location: 3012 - 3707 (+)
Gene ID: HRGMv2_4357_14_4
Type: TC
Location: 4131 - 4982 (+)
Gene ID: HRGMv2_4357_14_5
Type: TC
Location: 5026 - 5868 (+)
Gene ID: HRGMv2_4357_14_6
Type: peptidase
Location: 5940 - 7271 (+)
Gene ID: HRGMv2_4357_14_7
Type: TC
Location: 7313 - 8392 (+)
Gene ID: HRGMv2_4357_14_8
Type: TC
Location: 8395 - 9090 (+)
Gene ID: HRGMv2_4357_14_9
Type: TF
Location: 9292 - 9999 (-)
Gene ID: HRGMv2_4357_14_10
Type: CAZyme
Location: 9999 - 11165 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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