Cluster: HRGMv2_4357_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4357
- CGC Family ID: CGCFAM_00645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4357_5 | HRGMv2_4357_5_2 | 683 | 2065 | + | GH1 |
| TC | HRGMv2_4357_5 | HRGMv2_4357_5_3 | 2067 | 3374 | + | 4.A.3.2.9 |
| TC | HRGMv2_4357_5 | HRGMv2_4357_5_4 | 3393 | 3716 | + | 4.A.3.2.4 |
| TC | HRGMv2_4357_5 | HRGMv2_4357_5_5 | 3718 | 4032 | + | 4.A.3.2.4 |
| STP | HRGMv2_4357_5 | HRGMv2_4357_5_6 | 4216 | 5547 | + | Pyr_redox_2 |
| TC | HRGMv2_4357_5 | HRGMv2_4357_5_7 | 5676 | 7214 | + | 2.A.1.3.36 |
Gene ID: HRGMv2_4357_5_2
Type: CAZyme
Location: 683 - 2065 (+)
Type: CAZyme
Location: 683 - 2065 (+)
Gene ID: HRGMv2_4357_5_3
Type: TC
Location: 2067 - 3374 (+)
Type: TC
Location: 2067 - 3374 (+)
Gene ID: HRGMv2_4357_5_4
Type: TC
Location: 3393 - 3716 (+)
Type: TC
Location: 3393 - 3716 (+)
Gene ID: HRGMv2_4357_5_5
Type: TC
Location: 3718 - 4032 (+)
Type: TC
Location: 3718 - 4032 (+)
Gene ID: HRGMv2_4357_5_6
Type: STP
Location: 4216 - 5547 (+)
Type: STP
Location: 4216 - 5547 (+)
Gene ID: HRGMv2_4357_5_7
Type: TC
Location: 5676 - 7214 (+)
Type: TC
Location: 5676 - 7214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc gelidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.