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Cluster: HRGMv2_4337_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4337_5 HRGMv2_4337_5_6 5162 6670 - GT4
NULL(UNKNOWN) HRGMv2_4337_5 HRGMv2_4337_5_7 6781 6969 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4337_5 HRGMv2_4337_5_8 6981 9359 - 3.A.5.10.1
pfam HRGMv2_4337_5 HRGMv2_4337_5_9 9402 10079 - Sec-ASP3
TC HRGMv2_4337_5 HRGMv2_4337_5_10 10079 11701 - 3.A.5.10.1
TC HRGMv2_4337_5 HRGMv2_4337_5_11 11705 13270 - 3.A.5.10.1
TC HRGMv2_4337_5 HRGMv2_4337_5_12 13275 14522 - 3.A.5.10.1
CAZyme HRGMv2_4337_5 HRGMv2_4337_5_13 14783 16903 + GT8
NULL(UNKNOWN) HRGMv2_4337_5 HRGMv2_4337_5_14 16943 17392 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4337_5 HRGMv2_4337_5_15 17449 17709 - GT2
Gene ID: HRGMv2_4337_5_6
Type: CAZyme
Location: 5162 - 6670 (-)
Gene ID: HRGMv2_4337_5_7
Type:
Location: 6781 - 6969 (-)
Gene ID: HRGMv2_4337_5_8
Type: TC
Location: 6981 - 9359 (-)
Gene ID: HRGMv2_4337_5_9
Type: pfam
Location: 9402 - 10079 (-)
Gene ID: HRGMv2_4337_5_10
Type: TC
Location: 10079 - 11701 (-)
Gene ID: HRGMv2_4337_5_11
Type: TC
Location: 11705 - 13270 (-)
Gene ID: HRGMv2_4337_5_12
Type: TC
Location: 13275 - 14522 (-)
Gene ID: HRGMv2_4337_5_13
Type: CAZyme
Location: 14783 - 16903 (+)
Gene ID: HRGMv2_4337_5_14
Type:
Location: 16943 - 17392 (-)
Gene ID: HRGMv2_4337_5_15
Type: CAZyme
Location: 17449 - 17709 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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