Cluster: HRGMv2_4337_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4337
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4337_1 | HRGMv2_4337_1_189 | 205236 | 206786 | + | 3.A.1.120.2 |
| pfam | HRGMv2_4337_1 | HRGMv2_4337_1_190 | 206849 | 207931 | + | DHHA1 |
| TF | HRGMv2_4337_1 | HRGMv2_4337_1_191 | 207954 | 208196 | + | HTH_DeoR |
| TC | HRGMv2_4337_1 | HRGMv2_4337_1_192 | 208444 | 209820 | - | 2.A.26.1.9 |
| CAZyme | HRGMv2_4337_1 | HRGMv2_4337_1_193 | 210276 | 211421 | - | CE9 |
Gene ID: HRGMv2_4337_1_189
Type: TC
Location: 205236 - 206786 (+)
Type: TC
Location: 205236 - 206786 (+)
Gene ID: HRGMv2_4337_1_190
Type: pfam
Location: 206849 - 207931 (+)
Type: pfam
Location: 206849 - 207931 (+)
Gene ID: HRGMv2_4337_1_191
Type: TF
Location: 207954 - 208196 (+)
Type: TF
Location: 207954 - 208196 (+)
Gene ID: HRGMv2_4337_1_192
Type: TC
Location: 208444 - 209820 (-)
Type: TC
Location: 208444 - 209820 (-)
Gene ID: HRGMv2_4337_1_193
Type: CAZyme
Location: 210276 - 211421 (-)
Type: CAZyme
Location: 210276 - 211421 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus ingluviei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.