dbCAN Logo

Cluster: HRGMv2_4337_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4337_1 HRGMv2_4337_1_175 192814 193575 + 2.A.109.1.3
pfam HRGMv2_4337_1 HRGMv2_4337_1_176 193576 193893 + Thioredoxin | HyaE | Thioredoxin_2 | TraF
STP HRGMv2_4337_1 HRGMv2_4337_1_177 194069 194989 + PfkB
TC HRGMv2_4337_1 HRGMv2_4337_1_178 195437 196579 + 9.B.34.1.1
NULL(UNKNOWN) HRGMv2_4337_1 HRGMv2_4337_1_179 196576 197295 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4337_1 HRGMv2_4337_1_180 197292 197888 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4337_1 HRGMv2_4337_1_181 197889 199166 + GT2
pfam HRGMv2_4337_1 HRGMv2_4337_1_182 199209 199577 + PTPS
STP HRGMv2_4337_1 HRGMv2_4337_1_183 199585 200310 + EAL
TC HRGMv2_4337_1 HRGMv2_4337_1_184 200406 201998 + 2.A.3.1.4
Gene ID: HRGMv2_4337_1_175
Type: TC
Location: 192814 - 193575 (+)
Gene ID: HRGMv2_4337_1_176
Type: pfam
Location: 193576 - 193893 (+)
Gene ID: HRGMv2_4337_1_177
Type: STP
Location: 194069 - 194989 (+)
Gene ID: HRGMv2_4337_1_178
Type: TC
Location: 195437 - 196579 (+)
Gene ID: HRGMv2_4337_1_179
Type:
Location: 196576 - 197295 (+)
Gene ID: HRGMv2_4337_1_180
Type:
Location: 197292 - 197888 (+)
Gene ID: HRGMv2_4337_1_181
Type: CAZyme
Location: 197889 - 199166 (+)
Gene ID: HRGMv2_4337_1_182
Type: pfam
Location: 199209 - 199577 (+)
Gene ID: HRGMv2_4337_1_183
Type: STP
Location: 199585 - 200310 (+)
Gene ID: HRGMv2_4337_1_184
Type: TC
Location: 200406 - 201998 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List