Cluster: HRGMv2_4337_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4337
- CGC Family ID: CGCFAM_00255
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4337_15 | HRGMv2_4337_15_32 | 30000 | 31418 | + | 2.A.3.2.11 |
| TC | HRGMv2_4337_15 | HRGMv2_4337_15_33 | 31570 | 33789 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_4337_15 | HRGMv2_4337_15_34 | 33997 | 34182 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4337_15 | HRGMv2_4337_15_35 | 34356 | 34622 | + | PTS-HPr |
| TC | HRGMv2_4337_15 | HRGMv2_4337_15_36 | 34624 | 36312 | + | 8.A.7.1.1 |
| CAZyme | HRGMv2_4337_15 | HRGMv2_4337_15_37 | 36408 | 37664 | + | GT4 |
| CAZyme | HRGMv2_4337_15 | HRGMv2_4337_15_38 | 37664 | 38686 | + | GT4 |
Gene ID: HRGMv2_4337_15_32
Type: TC
Location: 30000 - 31418 (+)
Type: TC
Location: 30000 - 31418 (+)
Gene ID: HRGMv2_4337_15_33
Type: TC
Location: 31570 - 33789 (-)
Type: TC
Location: 31570 - 33789 (-)
Gene ID: HRGMv2_4337_15_34
Type:
Location: 33997 - 34182 (+)
Type:
Location: 33997 - 34182 (+)
Gene ID: HRGMv2_4337_15_35
Type: STP
Location: 34356 - 34622 (+)
Type: STP
Location: 34356 - 34622 (+)
Gene ID: HRGMv2_4337_15_36
Type: TC
Location: 34624 - 36312 (+)
Type: TC
Location: 34624 - 36312 (+)
Gene ID: HRGMv2_4337_15_37
Type: CAZyme
Location: 36408 - 37664 (+)
Type: CAZyme
Location: 36408 - 37664 (+)
Gene ID: HRGMv2_4337_15_38
Type: CAZyme
Location: 37664 - 38686 (+)
Type: CAZyme
Location: 37664 - 38686 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus ingluviei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.