Cluster: HRGMv2_4337_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4337
- CGC Family ID: CGCFAM_00769
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4337_1 | HRGMv2_4337_1_54 | 69020 | 69691 | + | 3.A.1.122.16 |
| TC | HRGMv2_4337_1 | HRGMv2_4337_1_55 | 69788 | 71761 | + | 3.A.1.122.13 |
| TF | HRGMv2_4337_1 | HRGMv2_4337_1_56 | 71855 | 72313 | + | Arg_repressor |
| TF | HRGMv2_4337_1 | HRGMv2_4337_1_57 | 72369 | 72671 | - | HTH_5 |
| CAZyme | HRGMv2_4337_1 | HRGMv2_4337_1_58 | 72755 | 74728 | - | GH73 |
Gene ID: HRGMv2_4337_1_54
Type: TC
Location: 69020 - 69691 (+)
Type: TC
Location: 69020 - 69691 (+)
Gene ID: HRGMv2_4337_1_55
Type: TC
Location: 69788 - 71761 (+)
Type: TC
Location: 69788 - 71761 (+)
Gene ID: HRGMv2_4337_1_56
Type: TF
Location: 71855 - 72313 (+)
Type: TF
Location: 71855 - 72313 (+)
Gene ID: HRGMv2_4337_1_57
Type: TF
Location: 72369 - 72671 (-)
Type: TF
Location: 72369 - 72671 (-)
Gene ID: HRGMv2_4337_1_58
Type: CAZyme
Location: 72755 - 74728 (-)
Type: CAZyme
Location: 72755 - 74728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus ingluviei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.