Cluster: HRGMv2_4337_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4337
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4337_11 | HRGMv2_4337_11_51 | 52781 | 54232 | + | 2.A.3.3.23 |
| pfam | HRGMv2_4337_11 | HRGMv2_4337_11_52 | 54216 | 55571 | + | Aminotran_1_2 | Aminotran_3 |
| STP | HRGMv2_4337_11 | HRGMv2_4337_11_53 | 55619 | 56428 | - | EAL |
| CAZyme | HRGMv2_4337_11 | HRGMv2_4337_11_54 | 56421 | 57743 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4337_11 | HRGMv2_4337_11_55 | 57721 | 58224 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4337_11 | HRGMv2_4337_11_56 | 58432 | 59175 | - | H2O2_YaaD |
| TC | HRGMv2_4337_11 | HRGMv2_4337_11_57 | 59263 | 60666 | - | 2.A.1.3.39 |
Gene ID: HRGMv2_4337_11_51
Type: TC
Location: 52781 - 54232 (+)
Type: TC
Location: 52781 - 54232 (+)
Gene ID: HRGMv2_4337_11_52
Type: pfam
Location: 54216 - 55571 (+)
Type: pfam
Location: 54216 - 55571 (+)
Gene ID: HRGMv2_4337_11_53
Type: STP
Location: 55619 - 56428 (-)
Type: STP
Location: 55619 - 56428 (-)
Gene ID: HRGMv2_4337_11_54
Type: CAZyme
Location: 56421 - 57743 (-)
Type: CAZyme
Location: 56421 - 57743 (-)
Gene ID: HRGMv2_4337_11_55
Type:
Location: 57721 - 58224 (-)
Type:
Location: 57721 - 58224 (-)
Gene ID: HRGMv2_4337_11_56
Type: pfam
Location: 58432 - 59175 (-)
Type: pfam
Location: 58432 - 59175 (-)
Gene ID: HRGMv2_4337_11_57
Type: TC
Location: 59263 - 60666 (-)
Type: TC
Location: 59263 - 60666 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus ingluviei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.