Cluster: HRGMv2_4337_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4337
- CGC Family ID: CGCFAM_02724
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4337_6 | HRGMv2_4337_6_80 | 78391 | 80637 | + | GT51 |
| TC | HRGMv2_4337_6 | HRGMv2_4337_6_81 | 80705 | 82453 | - | 3.A.1.129.1 |
| TC | HRGMv2_4337_6 | HRGMv2_4337_6_82 | 82443 | 84176 | - | 3.A.1.129.1 |
| TC | HRGMv2_4337_6 | HRGMv2_4337_6_83 | 84180 | 85202 | - | 3.D.4.3.2 |
| TC | HRGMv2_4337_6 | HRGMv2_4337_6_84 | 85203 | 86642 | - | 3.D.4.3.2 |
Gene ID: HRGMv2_4337_6_80
Type: CAZyme
Location: 78391 - 80637 (+)
Type: CAZyme
Location: 78391 - 80637 (+)
Gene ID: HRGMv2_4337_6_81
Type: TC
Location: 80705 - 82453 (-)
Type: TC
Location: 80705 - 82453 (-)
Gene ID: HRGMv2_4337_6_82
Type: TC
Location: 82443 - 84176 (-)
Type: TC
Location: 82443 - 84176 (-)
Gene ID: HRGMv2_4337_6_83
Type: TC
Location: 84180 - 85202 (-)
Type: TC
Location: 84180 - 85202 (-)
Gene ID: HRGMv2_4337_6_84
Type: TC
Location: 85203 - 86642 (-)
Type: TC
Location: 85203 - 86642 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus ingluviei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.