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Cluster: HRGMv2_4336_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4336_1 HRGMv2_4336_1_492 461860 464523 - 3.A.3.2.28
pfam HRGMv2_4336_1 HRGMv2_4336_1_493 464919 465602 + DUF1275
TC HRGMv2_4336_1 HRGMv2_4336_1_494 466000 466848 + 3.A.1.24.6
TC HRGMv2_4336_1 HRGMv2_4336_1_495 466965 467810 + 3.A.1.24.6
peptidase HRGMv2_4336_1 HRGMv2_4336_1_496 467873 469219 + M20.UNW
TC HRGMv2_4336_1 HRGMv2_4336_1_497 469224 470303 + 3.A.1.24.6
TC HRGMv2_4336_1 HRGMv2_4336_1_498 470306 471001 + 3.A.1.24.6
TF HRGMv2_4336_1 HRGMv2_4336_1_499 471100 471807 - GntR
CAZyme HRGMv2_4336_1 HRGMv2_4336_1_500 471807 472967 - CE9
pfam HRGMv2_4336_1 HRGMv2_4336_1_501 473112 473612 - PgpA
STP HRGMv2_4336_1 HRGMv2_4336_1_502 473881 475218 - Pyr_redox_2
TC HRGMv2_4336_1 HRGMv2_4336_1_503 475575 476156 + 3.A.1.30.2
TC HRGMv2_4336_1 HRGMv2_4336_1_504 476149 477558 + 3.A.1.30.1
NULL(UNKNOWN) HRGMv2_4336_1 HRGMv2_4336_1_505 477555 478217 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4336_1 HRGMv2_4336_1_506 478228 478899 + TENA_THI-4
TC HRGMv2_4336_1 HRGMv2_4336_1_507 479115 480365 + 2.A.1.47.1
TC HRGMv2_4336_1 HRGMv2_4336_1_508 480418 481773 - 2.A.1.3.61
Gene ID: HRGMv2_4336_1_492
Type: TC
Location: 461860 - 464523 (-)
Gene ID: HRGMv2_4336_1_493
Type: pfam
Location: 464919 - 465602 (+)
Gene ID: HRGMv2_4336_1_494
Type: TC
Location: 466000 - 466848 (+)
Gene ID: HRGMv2_4336_1_495
Type: TC
Location: 466965 - 467810 (+)
Gene ID: HRGMv2_4336_1_496
Type: peptidase
Location: 467873 - 469219 (+)
Gene ID: HRGMv2_4336_1_497
Type: TC
Location: 469224 - 470303 (+)
Gene ID: HRGMv2_4336_1_498
Type: TC
Location: 470306 - 471001 (+)
Gene ID: HRGMv2_4336_1_499
Type: TF
Location: 471100 - 471807 (-)
Gene ID: HRGMv2_4336_1_500
Type: CAZyme
Location: 471807 - 472967 (-)
Gene ID: HRGMv2_4336_1_501
Type: pfam
Location: 473112 - 473612 (-)
Gene ID: HRGMv2_4336_1_502
Type: STP
Location: 473881 - 475218 (-)
Gene ID: HRGMv2_4336_1_503
Type: TC
Location: 475575 - 476156 (+)
Gene ID: HRGMv2_4336_1_504
Type: TC
Location: 476149 - 477558 (+)
Gene ID: HRGMv2_4336_1_505
Type:
Location: 477555 - 478217 (+)
Gene ID: HRGMv2_4336_1_506
Type: pfam
Location: 478228 - 478899 (+)
Gene ID: HRGMv2_4336_1_507
Type: TC
Location: 479115 - 480365 (+)
Gene ID: HRGMv2_4336_1_508
Type: TC
Location: 480418 - 481773 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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