Cluster: HRGMv2_4336_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4336
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4336_1 | HRGMv2_4336_1_362 | 348937 | 351153 | - | GH36 |
| TF | HRGMv2_4336_1 | HRGMv2_4336_1_363 | 351224 | 352240 | - | LacI |
| TC | HRGMv2_4336_1 | HRGMv2_4336_1_364 | 352410 | 354323 | + | 2.A.2.2.1 |
| TC | HRGMv2_4336_1 | HRGMv2_4336_1_365 | 354377 | 354697 | - | 2.A.7.1.4 |
| pfam | HRGMv2_4336_1 | HRGMv2_4336_1_366 | 354866 | 355360 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_4336_1 | HRGMv2_4336_1_367 | 355457 | 356080 | - | 3.A.1.134.9 |
Gene ID: HRGMv2_4336_1_362
Type: CAZyme
Location: 348937 - 351153 (-)
Type: CAZyme
Location: 348937 - 351153 (-)
Gene ID: HRGMv2_4336_1_363
Type: TF
Location: 351224 - 352240 (-)
Type: TF
Location: 351224 - 352240 (-)
Gene ID: HRGMv2_4336_1_364
Type: TC
Location: 352410 - 354323 (+)
Type: TC
Location: 352410 - 354323 (+)
Gene ID: HRGMv2_4336_1_365
Type: TC
Location: 354377 - 354697 (-)
Type: TC
Location: 354377 - 354697 (-)
Gene ID: HRGMv2_4336_1_366
Type: pfam
Location: 354866 - 355360 (-)
Type: pfam
Location: 354866 - 355360 (-)
Gene ID: HRGMv2_4336_1_367
Type: TC
Location: 355457 - 356080 (-)
Type: TC
Location: 355457 - 356080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc sp900554745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.