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Cluster: HRGMv2_4336_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4336_7 HRGMv2_4336_7_56 52857 54371 + 3.A.2.1.5
TC HRGMv2_4336_7 HRGMv2_4336_7_57 54387 55295 + 3.A.2.1.1
TC HRGMv2_4336_7 HRGMv2_4336_7_58 55400 56800 + 3.A.2.1.5
pfam HRGMv2_4336_7 HRGMv2_4336_7_59 56815 57255 + ATP-synt_DE | ATP-synt_DE_N
pfam HRGMv2_4336_7 HRGMv2_4336_7_60 57581 58627 + CypI | Phosphonate-bd
TC HRGMv2_4336_7 HRGMv2_4336_7_61 58782 59531 + 3.A.1.9.1
pfam HRGMv2_4336_7 HRGMv2_4336_7_62 59528 60349 + BPD_transp_1
TC HRGMv2_4336_7 HRGMv2_4336_7_63 60361 61170 + 3.A.1.9.1
pfam HRGMv2_4336_7 HRGMv2_4336_7_64 61213 62718 + Metallophos | 5_nucleotid_C | PGA_cap
CAZyme HRGMv2_4336_7 HRGMv2_4336_7_65 62869 63498 + CBM50
Gene ID: HRGMv2_4336_7_56
Type: TC
Location: 52857 - 54371 (+)
Gene ID: HRGMv2_4336_7_57
Type: TC
Location: 54387 - 55295 (+)
Gene ID: HRGMv2_4336_7_58
Type: TC
Location: 55400 - 56800 (+)
Gene ID: HRGMv2_4336_7_59
Type: pfam
Location: 56815 - 57255 (+)
Gene ID: HRGMv2_4336_7_60
Type: pfam
Location: 57581 - 58627 (+)
Gene ID: HRGMv2_4336_7_61
Type: TC
Location: 58782 - 59531 (+)
Gene ID: HRGMv2_4336_7_62
Type: pfam
Location: 59528 - 60349 (+)
Gene ID: HRGMv2_4336_7_63
Type: TC
Location: 60361 - 61170 (+)
Gene ID: HRGMv2_4336_7_64
Type: pfam
Location: 61213 - 62718 (+)
Gene ID: HRGMv2_4336_7_65
Type: CAZyme
Location: 62869 - 63498 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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