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Cluster: HRGMv2_4336_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4336_6 HRGMv2_4336_6_60 62695 63825 - GT2
TC HRGMv2_4336_6 HRGMv2_4336_6_61 63848 64675 - 3.A.1.104.1
TC HRGMv2_4336_6 HRGMv2_4336_6_62 64681 65661 - 3.A.1.104.1
TF HRGMv2_4336_6 HRGMv2_4336_6_63 65786 66502 - Trans_reg_C
STP HRGMv2_4336_6 HRGMv2_4336_6_64 66499 69081 - HATPase_c | HisKA
TC HRGMv2_4336_6 HRGMv2_4336_6_65 69094 69642 - 3.A.3.7.1
TC HRGMv2_4336_6 HRGMv2_4336_6_66 69651 71666 - 3.A.3.7.1
TC HRGMv2_4336_6 HRGMv2_4336_6_67 71677 73338 - 3.A.3.7.1
pfam HRGMv2_4336_6 HRGMv2_4336_6_68 73654 74850 - CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
CAZyme HRGMv2_4336_6 HRGMv2_4336_6_69 74991 76274 - PL1_6
Gene ID: HRGMv2_4336_6_60
Type: CAZyme
Location: 62695 - 63825 (-)
Gene ID: HRGMv2_4336_6_61
Type: TC
Location: 63848 - 64675 (-)
Gene ID: HRGMv2_4336_6_62
Type: TC
Location: 64681 - 65661 (-)
Gene ID: HRGMv2_4336_6_63
Type: TF
Location: 65786 - 66502 (-)
Gene ID: HRGMv2_4336_6_64
Type: STP
Location: 66499 - 69081 (-)
Gene ID: HRGMv2_4336_6_65
Type: TC
Location: 69094 - 69642 (-)
Gene ID: HRGMv2_4336_6_66
Type: TC
Location: 69651 - 71666 (-)
Gene ID: HRGMv2_4336_6_67
Type: TC
Location: 71677 - 73338 (-)
Gene ID: HRGMv2_4336_6_68
Type: pfam
Location: 73654 - 74850 (-)
Gene ID: HRGMv2_4336_6_69
Type: CAZyme
Location: 74991 - 76274 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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