Cluster: HRGMv2_4336_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4336
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4336_5 | HRGMv2_4336_5_138 | 136670 | 139225 | + | 2.A.1.3.35 |
| pfam | HRGMv2_4336_5 | HRGMv2_4336_5_139 | 139283 | 139939 | + | YfbR-like | HD_3 |
| TC | HRGMv2_4336_5 | HRGMv2_4336_5_140 | 139953 | 141935 | + | 3.A.1.122.13 |
| TC | HRGMv2_4336_5 | HRGMv2_4336_5_141 | 142038 | 143756 | + | 3.A.1.135.8 |
| TC | HRGMv2_4336_5 | HRGMv2_4336_5_142 | 143759 | 145540 | + | 3.A.1.135.8 |
| CAZyme | HRGMv2_4336_5 | HRGMv2_4336_5_143 | 145693 | 146919 | + | GT4 |
| CAZyme | HRGMv2_4336_5 | HRGMv2_4336_5_144 | 146920 | 147927 | + | GT4 |
Gene ID: HRGMv2_4336_5_138
Type: TC
Location: 136670 - 139225 (+)
Type: TC
Location: 136670 - 139225 (+)
Gene ID: HRGMv2_4336_5_139
Type: pfam
Location: 139283 - 139939 (+)
Type: pfam
Location: 139283 - 139939 (+)
Gene ID: HRGMv2_4336_5_140
Type: TC
Location: 139953 - 141935 (+)
Type: TC
Location: 139953 - 141935 (+)
Gene ID: HRGMv2_4336_5_141
Type: TC
Location: 142038 - 143756 (+)
Type: TC
Location: 142038 - 143756 (+)
Gene ID: HRGMv2_4336_5_142
Type: TC
Location: 143759 - 145540 (+)
Type: TC
Location: 143759 - 145540 (+)
Gene ID: HRGMv2_4336_5_143
Type: CAZyme
Location: 145693 - 146919 (+)
Type: CAZyme
Location: 145693 - 146919 (+)
Gene ID: HRGMv2_4336_5_144
Type: CAZyme
Location: 146920 - 147927 (+)
Type: CAZyme
Location: 146920 - 147927 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc sp900554745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.